Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
UVM | rs6060855 | chr20:30298945 | C/T | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6060911 | chr20:30323938 | T/C | 0.000118 | 67 | 27.92 | 8.18 | 7.6 | KM Plot |
UVM | rs6060913 | chr20:30326840 | T/C | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6060939 | chr20:30364334 | T/C | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6060943 | chr20:30371454 | A/C | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6060951 | chr20:30379051 | A/T | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6060963 | chr20:30398364 | C/G | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6060964 | chr20:30400657 | C/T | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6060965 | chr20:30406098 | C/T | 6.07E-5 | 67 | 7.6 | 14.23 | 27.9 | KM Plot |
UVM | rs6060970 | chr20:30409573 | C/T | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6060971 | chr20:30411427 | T/C | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6060972 | chr20:30411600 | C/T | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6060973 | chr20:30411822 | C/T | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6060975 | chr20:30412918 | T/C | 6.07E-5 | 67 | 27.9 | 14.23 | 7.6 | KM Plot |
UVM | rs6060980 | chr20:30419954 | A/G | 7.4E-5 | 66 | 27.92 | 14.23 | 7.6 | KM Plot |